From 2821b8a5358bbcdf92be64becd17897dfe0956fa Mon Sep 17 00:00:00 2001
From: E Rasche <hxr@hx42.org>
Date: Sun, 2 Jul 2017 04:43:04 +0000
Subject: [PATCH 1/2] Planemo complained of this file being missing

---
 tools/crossmap/tool-data/tool_data_table_conf.xml.sample | 7 +++++++
 1 file changed, 7 insertions(+)
 create mode 100644 tools/crossmap/tool-data/tool_data_table_conf.xml.sample

diff --git a/tools/crossmap/tool-data/tool_data_table_conf.xml.sample b/tools/crossmap/tool-data/tool_data_table_conf.xml.sample
new file mode 100644
index 000000000..d5c59b96f
--- /dev/null
+++ b/tools/crossmap/tool-data/tool_data_table_conf.xml.sample
@@ -0,0 +1,7 @@
+<tables>
+    <!-- Locations of all fasta files under genome directory -->
+    <table name="all_fasta" comment_char="#">
+        <columns>value, dbkey, name, path</columns>
+        <file path="tool-data/all_fasta.loc" />
+    </table>
+</tables>

From c9cf18dfac7b6639ccc17cc6c172ca8a7692fc3a Mon Sep 17 00:00:00 2001
From: E Rasche <hxr@hx42.org>
Date: Sun, 2 Jul 2017 04:46:19 +0000
Subject: [PATCH 2/2] add missing liftOver

---
 tools/crossmap/tool-data/tool_data_table_conf.xml.sample | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/tools/crossmap/tool-data/tool_data_table_conf.xml.sample b/tools/crossmap/tool-data/tool_data_table_conf.xml.sample
index d5c59b96f..d2a8f5f02 100644
--- a/tools/crossmap/tool-data/tool_data_table_conf.xml.sample
+++ b/tools/crossmap/tool-data/tool_data_table_conf.xml.sample
@@ -4,4 +4,9 @@
         <columns>value, dbkey, name, path</columns>
         <file path="tool-data/all_fasta.loc" />
     </table>
+    <!-- Locations of all liftOver files -->
+    <table name="liftOver" comment_char="#">
+        <columns>value, dbkey, name</columns>
+        <file path="tool-data/liftOver.loc" />
+    </table>
 </tables>